Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490199_6368 | Not Available | Positive | 6885523 - 6886083 | 19906.7 |
| zinc transport system substrate-binding protein | SAMN04490199_6369 | Not Available | Positive | 6886103 - 6887023 | 33353.1 |
| zinc transport system atp-binding protein | SAMN04490199_6370 | Not Available | Positive | 6887020 - 6887766 | 27032.9 |
| zinc transport system permease protein | SAMN04490199_6371 | Not Available | Positive | 6887763 - 6888662 | 30829.2 |
| abc-type zn uptake system znuabc, zn-binding component znua | SAMN04490199_6372 | Not Available | Positive | 6888662 - 6889615 | 33245.9 |
| dna-binding transcriptional regulator, gntr family | SAMN04490199_6373 | Not Available | Negative | 6889596 - 6890321 | 27288.0 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN04490199_6374 | Not Available | Positive | 6890673 - 6891740 | 38237.4 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN04490199_6375 | Not Available | Positive | 6891854 - 6892660 | 29950.4 |
| putative spermidine/putrescine transport system permease protein | SAMN04490199_6376 | Not Available | Positive | 6892657 - 6893502 | 31083.6 |
| putative spermidine/putrescine transport system permease protein | SAMN04490199_6377 | Not Available | Positive | 6893489 - 6894289 | 29446.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





