Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit epsilon | SAMN04490199_0568 | Not Available | Positive | 592357 - 592968 | 22651.6 |
| acyl carrier protein | SAMN04490199_0569 | Not Available | Negative | 593144 - 593416 | 10573.7 |
| protein of unknown function | SAMN04490199_0571 | Not Available | Positive | 594467 - 594763 | 10720.9 |
| transcriptional regulator, asnc family | SAMN04490199_0573 | Not Available | Negative | 594939 - 595400 | 16399.9 |
| eama domain-containing membrane protein rard | SAMN04490199_0574 | Not Available | Positive | 595561 - 596457 | 31629.6 |
| superfamily ii dna and rna helicase | SAMN04490199_0575 | Not Available | Positive | 596518 - 597852 | 48600.3 |
| hypothetical protein | SAMN04490199_0576 | Not Available | Negative | 597991 - 599217 | 43341.9 |
| acetoin utilization deacetylase acuc | SAMN04490199_0577 | Not Available | Negative | 599389 - 600309 | 33970.5 |
| protein n-acetyltransferase, rimj/riml family | SAMN04490199_0578 | Not Available | Positive | 600386 - 600955 | 21545.8 |
| acyl-coa thioesterase-2 | SAMN04490199_0579 | Not Available | Positive | 600994 - 601863 | 32376.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





