Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein k (gspk) | SAMN04490199_6285 | Not Available | Negative | 6795914 - 6796615 | 25743.1 |
| type ii secretion system protein j (gspj) | SAMN04490199_6286 | Not Available | Negative | 6796612 - 6797220 | 22078.8 |
| type ii secretion system protein i (gspi) | SAMN04490199_6287 | Not Available | Negative | 6797217 - 6797549 | 11970.6 |
| type ii secretion system protein h (gsph) | SAMN04490199_6288 | Not Available | Negative | 6797546 - 6797971 | 15216.6 |
| type ii secretion system protein g (gspg) | SAMN04490199_6289 | Not Available | Negative | 6797979 - 6798389 | 14523.2 |
| type ii secretion system protein f (gspf) | SAMN04490199_6290 | Not Available | Negative | 6798410 - 6799612 | 42859.4 |
| type ii secretion system protein e (gspe) | SAMN04490199_6291 | Not Available | Negative | 6799609 - 6801309 | 62247.5 |
| iron complex outermembrane recepter protein | SAMN04490199_6292 | Not Available | Negative | 6801706 - 6804096 | 85899.2 |
| cyd operon protein ybge (cyd_oper_ybge) | SAMN04490199_6293 | Not Available | Negative | 6804273 - 6804560 | 10354.1 |
| cyd operon protein ybgt | SAMN04490199_6294 | Not Available | Negative | 6804557 - 6804679 | 4583.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





