Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama domain-containing membrane protein rard | SAMN04490199_6273 | Not Available | Negative | 6784469 - 6785380 | 32153.5 |
| ornithine cyclodeaminase | SAMN04490199_6274 | Not Available | Negative | 6785377 - 6786489 | 40152.4 |
| transcriptional regulator, lysr family | SAMN04490199_6275 | Not Available | Negative | 6787105 - 6788019 | 33511.4 |
| hypothetical protein | SAMN04490199_6278 | Not Available | Positive | 6788891 - 6789250 | 13706.3 |
| hypothetical protein | SAMN04490199_6279 | Not Available | Positive | 6789398 - 6790843 | 54127.4 |
| hypothetical protein | SAMN04490199_6280 | Not Available | Positive | 6790840 - 6791454 | 23485.4 |
| type ii secretion system protein d (gspd) | SAMN04490199_6281 | Not Available | Negative | 6791695 - 6793833 | 76313.8 |
| general secretion pathway protein n | SAMN04490199_6282 | Not Available | Negative | 6793830 - 6794348 | 18531.6 |
| type ii secretion system protein m (gspm) | SAMN04490199_6283 | Not Available | Negative | 6794345 - 6794944 | 22041.5 |
| general secretion pathway protein l | SAMN04490199_6284 | Not Available | Negative | 6794919 - 6795917 | 37217.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





