Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain alpha-keto acid dehydrogenase e2 component | SAMN04490199_6221 | Not Available | Positive | 6726973 - 6728241 | 45031.7 |
| dihydrolipoamide dehydrogenase | SAMN04490199_6222 | Not Available | Positive | 6728246 - 6729625 | 48796.3 |
| branched chain amino acid aminotransferase apoenzyme | SAMN04490199_6223 | Not Available | Positive | 6729830 - 6730849 | 36855.9 |
| ribosomal protein s18 acetylase rimi | SAMN04490199_6224 | Not Available | Negative | 6730979 - 6731872 | 32240.9 |
| hypothetical protein | SAMN04490199_6225 | Not Available | Positive | 6732123 - 6733049 | 35073.6 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN04490199_6227 | Not Available | Positive | 6734368 - 6735147 | 28550.0 |
| histidine transport system permease protein | SAMN04490199_6228 | Not Available | Positive | 6735254 - 6735955 | 25776.2 |
| histidine transport system permease protein | SAMN04490199_6229 | Not Available | Positive | 6735952 - 6736665 | 26684.0 |
| histidine transport system atp-binding protein | SAMN04490199_6230 | Not Available | Positive | 6736669 - 6737508 | 30565.0 |
| dna-binding transcriptional regulator, lrp family | SAMN04490199_6231 | Not Available | Positive | 6737514 - 6738011 | 18534.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





