Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-550 pedf | SAMN04490199_6201 | Not Available | Negative | 6703256 - 6703717 | 16403.3 |
| alcohol dehydrogenase (cytochrome c) | SAMN04490199_6202 | Not Available | Positive | 6703973 - 6705880 | 69534.5 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN04490199_6203 | Not Available | Positive | 6705959 - 6706606 | 23197.4 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04490199_6204 | Not Available | Negative | 6708819 - 6709445 | 22842.9 |
| two-component system, narl family, sensor histidine kinase uhpb | SAMN04490199_6205 | Not Available | Negative | 6709442 - 6710704 | 46687.4 |
| hypothetical protein | SAMN04490199_6206 | Not Available | Negative | 6710707 - 6710823 | 4043.27 |
| abc transporter, substrate binding protein, pqq-dependent alcohol dehydrogenase system | SAMN04490199_6207 | Not Available | Positive | 6710984 - 6712168 | 43172.3 |
| pqq-dependent catabolism-associated beta-propeller protein | SAMN04490199_6208 | Not Available | Positive | 6712203 - 6713162 | 34959.1 |
| abc-2 type transport system atp-binding protein | SAMN04490199_6209 | Not Available | Positive | 6713159 - 6713899 | 26871.4 |
| abc-2 type transport system permease protein | SAMN04490199_6210 | Not Available | Positive | 6713896 - 6714687 | 29564.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





