Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase, is5 family | SAMN04490199_0555 | Not Available | Positive | 581667 - 582308 | 23948.1 |
| group ii intron reverse transcriptase/maturase | SAMN04490199_0557 | Not Available | Positive | 582697 - 583965 | 49070.2 |
| hypothetical protein | SAMN04490199_0560 | Not Available | Negative | 584697 - 584876 | 6657.97 |
| hypothetical protein | SAMN04490199_0561 | Not Available | Negative | 585190 - 585945 | 28574.2 |
| adenylate cyclase, class 3 | SAMN04490199_0562 | Not Available | Negative | 585960 - 587504 | 56583.4 |
| cyclic nucleotide-binding domain-containing protein | SAMN04490199_0563 | Not Available | Negative | 587585 - 588511 | 34234.9 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04490199_0564 | Not Available | Negative | 588971 - 590059 | 40658.9 |
| uncharacterised protein family (upf0259) | SAMN04490199_0565 | Not Available | Negative | 590100 - 590768 | 24687.4 |
| hypothetical protein | SAMN04490199_0566 | Not Available | Positive | 590941 - 591705 | 27086.5 |
| uncharacterized conserved protein, laba/duf88 family | SAMN04490199_0567 | Not Available | Positive | 591834 - 592310 | 17416.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





