Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-6-phosphate isomerase, cupin superfamily | SAMN04490199_0005 | Not Available | Positive | 3851 - 4228 | 14094.8 |
| peptidoglycan glycosyltransferase /cell elongation-specific peptidoglycan d,d-transpeptidase | SAMN04490199_0006 | Not Available | Positive | 4458 - 6350 | 70279.0 |
| uncharacterized conserved protein | SAMN04490199_0007 | Not Available | Negative | 6352 - 6753 | 15111.9 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04490199_0008 | Not Available | Positive | 6853 - 7326 | 18195.8 |
| dna damage-inducible dna polymerase ii | SAMN04490199_0009 | Not Available | Positive | 7418 - 9775 | 89846.2 |
| gst-like protein | SAMN04490199_0010 | Not Available | Positive | 9855 - 10478 | 22575.8 |
| flavin containing amine oxidoreductase | SAMN04490199_0011 | Not Available | Positive | 10475 - 11710 | 45153.5 |
| protein of unknown function | SAMN04490199_0012 | Not Available | Positive | 11841 - 12425 | 20535.9 |
| mannose-1-phosphate guanylyltransferase (gdp) /mannose-6-phosphate isomerase, type 2 | SAMN04490199_0013 | Not Available | Negative | 12429 - 13883 | 53062.4 |
| cyclohexyl-isocyanide hydratase | SAMN04490199_0014 | Not Available | Negative | 13998 - 14678 | 23945.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





