Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, dctm subunit | SAMN04490199_6191 | Not Available | Positive | 6689572 - 6690852 | 45255.1 |
| aldose 1-epimerase | SAMN04490199_6192 | Not Available | Positive | 6690852 - 6691760 | 32592.0 |
| anion transporter | SAMN04490199_6193 | Not Available | Negative | 6692043 - 6693521 | 51286.6 |
| signal transduction histidine kinase | SAMN04490199_6194 | Not Available | Negative | 6693602 - 6694972 | 50562.8 |
| alcohol dehydrogenase, class iv | SAMN04490199_6195 | Not Available | Negative | 6694956 - 6696119 | 41317.2 |
| aldehyde dehydrogenase | SAMN04490199_6196 | Not Available | Negative | 6697104 - 6698624 | 55039.9 |
| alcohol dehydrogenase (cytochrome c) | SAMN04490199_6197 | Not Available | Negative | 6698746 - 6700521 | 64539.6 |
| quinoprotein relay system zinc metallohydrolase 1 | SAMN04490199_6198 | Not Available | Negative | 6700657 - 6701589 | 34207.0 |
| sulfur-oxidizing protein soxy | SAMN04490199_6199 | Not Available | Negative | 6701606 - 6702367 | 27716.4 |
| abc-type amino acid transport substrate-binding protein | SAMN04490199_6200 | Not Available | Negative | 6702377 - 6703252 | 32937.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





