Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease proteolytic subunit clpp | SAMN04490199_6148 | Not Available | Negative | 6647545 - 6648180 | 23437.2 |
| trigger factor | SAMN04490199_6149 | Not Available | Negative | 6648272 - 6649582 | 48319.4 |
| rna-directed dna polymerase | SAMN04490199_6151 | Not Available | Negative | 6649712 - 6651415 | 65038.5 |
| Trna-his | Not Available | Not Available | Positive | 6652839 - 6652914 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 6652992 - 6653076 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 6653134 - 6653209 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 6653242 - 6653318 | Not Available |
| methenyltetrahydrofolate cyclohydrolase /5,10-methylenetetrahydrofolate dehydrogenase (nadp+) | SAMN04490199_6158 | Not Available | Positive | 6653594 - 6654448 | 30305.9 |
| hypothetical protein | SAMN04490199_6159 | Not Available | Positive | 6654590 - 6654874 | 9685.7 |
| murein-dd-endopeptidase. serine peptidase. merops family s11 | SAMN04490199_6160 | Not Available | Positive | 6655208 - 6656131 | 33667.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





