Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMN04490199_6106 | Not Available | Negative | 6600801 - 6602342 | 56556.9 |
| is66 orf2 like protein | SAMN04490199_6107 | Not Available | Negative | 6602407 - 6602745 | 13065.8 |
| hypothetical protein | SAMN04490199_6108 | Not Available | Negative | 6602745 - 6603041 | 10828.1 |
| fatty-acyl-coa synthase | SAMN04490199_6110 | Not Available | Negative | 6603725 - 6605407 | 61977.6 |
| isovaleryl-coa dehydrogenase | SAMN04490199_6111 | Not Available | Positive | 6605559 - 6606722 | 42347.7 |
| 3-methylcrotonyl-coa carboxylase beta subunit | SAMN04490199_6112 | Not Available | Positive | 6606734 - 6608341 | 57455.1 |
| methylglutaconyl-coa hydratase | SAMN04490199_6113 | Not Available | Positive | 6608357 - 6609163 | 29421.2 |
| 3-methylcrotonoyl-coa carboxylase, alpha subunit | SAMN04490199_6114 | Not Available | Positive | 6609160 - 6611085 | 68482.0 |
| sos-response transcriptional repressor lexa (reca-mediated autopeptidase) | SAMN04490199_6115 | Not Available | Negative | 6611082 - 6611717 | 23500.3 |
| protein of unknown function | SAMN04490199_6116 | Not Available | Positive | 6611847 - 6612197 | 12583.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





