Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl/phenylalanyl-trna--protein transferase | SAMN04490199_6026 | Not Available | Positive | 6510259 - 6510939 | 25411.2 |
| arginine-trna-protein transferase | SAMN04490199_6027 | Not Available | Positive | 6510995 - 6511702 | 27729.1 |
| bacterial translation initiation factor 1 (bif-1) | SAMN04490199_6028 | Not Available | Positive | 6511803 - 6512021 | 8303.06 |
| atp-dependent clp protease atp-binding subunit clpa | SAMN04490199_6029 | Not Available | Negative | 6512207 - 6514477 | 83296.7 |
| atp-dependent clp protease adaptor protein clps | SAMN04490199_6030 | Not Available | Negative | 6514507 - 6514875 | 13789.4 |
| cold-shock dna-binding protein family | SAMN04490199_6031 | Not Available | Positive | 6515100 - 6515378 | 9859.88 |
| isocitrate dehydrogenase (nadp) | SAMN04490199_6032 | Not Available | Negative | 6515458 - 6516714 | 45503.9 |
| isocitrate dehydrogenase | SAMN04490199_6033 | Not Available | Positive | 6517220 - 6519445 | 80169.9 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04490199_6034 | Not Available | Positive | 6519600 - 6520046 | 16821.1 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN04490199_6035 | Not Available | Positive | 6520106 - 6521230 | 41707.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





