Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenate reductase | SAMN04490199_6006 | Not Available | Positive | 6492721 - 6493074 | 12866.8 |
| nad(p)h dehydrogenase (quinone) | SAMN04490199_6007 | Not Available | Positive | 6493071 - 6493685 | 21419.9 |
| uncharacterized membrane protein | SAMN04490199_6008 | Not Available | Positive | 6493669 - 6494088 | 15595.7 |
| 3-methyladenine dna glycosylase tag | SAMN04490199_6009 | Not Available | Negative | 6494172 - 6494843 | 25197.6 |
| trna 2-thiocytidine biosynthesis protein ttca | SAMN04490199_6010 | Not Available | Negative | 6494911 - 6495735 | 31115.7 |
| protein of unknown function | SAMN04490199_6011 | Not Available | Positive | 6496039 - 6496641 | 21730.9 |
| sprt protein | SAMN04490199_6012 | Not Available | Positive | 6496771 - 6497265 | 19610.6 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN04490199_6013 | Not Available | Negative | 6497380 - 6498561 | 42134.9 |
| trna 2-thiouridine synthesizing protein d | SAMN04490199_6014 | Not Available | Positive | 6498720 - 6499112 | 14128.7 |
| trna 2-thiouridine synthesizing protein c | SAMN04490199_6015 | Not Available | Positive | 6499114 - 6499464 | 12403.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





