Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04490199_5944 | Not Available | Positive | 6433800 - 6434618 | 29805.5 |
| putative oxidoreductase | SAMN04490199_5945 | Not Available | Negative | 6434673 - 6435059 | 14097.0 |
| dna-binding transcriptional regulator, lysr family | SAMN04490199_5946 | Not Available | Negative | 6435137 - 6436012 | 32098.7 |
| predicted arabinose efflux permease, mfs family | SAMN04490199_5947 | Not Available | Positive | 6436124 - 6437356 | 42662.3 |
| putative nad(p)h quinone oxidoreductase, pig3 family | SAMN04490199_5948 | Not Available | Positive | 6437353 - 6438351 | 34879.6 |
| n-ethylmaleimide reductase | SAMN04490199_5949 | Not Available | Negative | 6438411 - 6439535 | 40724.1 |
| putative intracellular protease/amidase | SAMN04490199_5950 | Not Available | Negative | 6439623 - 6440300 | 23798.1 |
| transcriptional regulator, tetr family | SAMN04490199_5951 | Not Available | Negative | 6440327 - 6440926 | 21513.8 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04490199_5952 | Not Available | Positive | 6441100 - 6442044 | 34657.7 |
| predicted acetyltransferase | SAMN04490199_5953 | Not Available | Negative | 6442041 - 6442547 | 19385.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





