Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein i | SAMN04490199_5933 | Not Available | Positive | 6425704 - 6426090 | 13954.1 |
| type ii secretion system protein c (gspc) | SAMN04490199_5934 | Not Available | Negative | 6426077 - 6426508 | 14655.9 |
| general secretion pathway protein h | SAMN04490199_5935 | Not Available | Positive | 6426601 - 6427053 | 16802.4 |
| general secretion pathway protein j | SAMN04490199_5936 | Not Available | Positive | 6427050 - 6427661 | 22345.0 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN04490199_5938 | Not Available | Negative | 6428621 - 6429547 | 32807.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04490199_5939 | Not Available | Negative | 6429585 - 6430130 | 20428.7 |
| tonb c terminal | SAMN04490199_5940 | Not Available | Negative | 6430127 - 6430834 | 25213.5 |
| hypothetical protein | SAMN04490199_5941 | Not Available | Positive | 6430988 - 6431299 | 10819.1 |
| hypothetical protein | SAMN04490199_5942 | Not Available | Positive | 6431411 - 6432307 | 32072.2 |
| alginate export | SAMN04490199_5943 | Not Available | Positive | 6432318 - 6433709 | 51791.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





