Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMN04490199_5923 | Not Available | Negative | 6401666 - 6402268 | 22959.1 |
| filamentous hemagglutinin family n-terminal domain-containing protein | SAMN04490199_5924 | Not Available | Negative | 6402711 - 6415331 | 429558.0 |
| abc-type phosphate transport system, substrate-binding protein | SAMN04490199_5925 | Not Available | Negative | 6415560 - 6416732 | 40086.0 |
| type ii secretion system protein f (gspf) | SAMN04490199_5926 | Not Available | Negative | 6417192 - 6418403 | 43298.1 |
| type ii secretion system protein e (gspe) | SAMN04490199_5927 | Not Available | Negative | 6418403 - 6419821 | 51488.2 |
| general secretion pathway protein d | SAMN04490199_5928 | Not Available | Negative | 6420323 - 6422626 | 80975.2 |
| general secretion pathway protein m | SAMN04490199_5929 | Not Available | Negative | 6422623 - 6423135 | 18393.0 |
| general secretion pathway protein l | SAMN04490199_5930 | Not Available | Negative | 6423128 - 6424210 | 37796.2 |
| type ii secretion system protein k (gspk) | SAMN04490199_5931 | Not Available | Negative | 6424207 - 6425097 | 33526.5 |
| general secretion pathway protein g | SAMN04490199_5932 | Not Available | Negative | 6425106 - 6425555 | 16232.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





