Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN04490199_0523 | Not Available | Negative | 549950 - 551233 | 45155.2 |
| thiamine-phosphate diphosphorylase | SAMN04490199_0524 | Not Available | Negative | 551245 - 551874 | 22294.8 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN04490199_0525 | Not Available | Negative | 551893 - 552690 | 28132.8 |
| signal transduction histidine kinase | SAMN04490199_0526 | Not Available | Positive | 552979 - 555372 | 87938.0 |
| putative acyl-coa dehydrogenase | SAMN04490199_0527 | Not Available | Positive | 555442 - 557094 | 59851.4 |
| amp nucleosidase | SAMN04490199_0528 | Not Available | Positive | 557259 - 558722 | 54542.3 |
| ribosomal large subunit pseudouridine synthase e | SAMN04490199_0529 | Not Available | Positive | 558794 - 559429 | 23922.8 |
| protein of unknown function | SAMN04490199_0530 | Not Available | Negative | 559424 - 559642 | 7842.02 |
| transcriptional regulator, asnc family | SAMN04490199_0531 | Not Available | Negative | 559796 - 560275 | 18053.9 |
| hypothetical protein | SAMN04490199_0533 | Not Available | Positive | 560691 - 561920 | 45422.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





