Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | SAMN04490199_5830 | Not Available | Negative | 6300661 - 6303180 | 91103.0 |
| error-prone dna polymerase | SAMN04490199_5831 | Not Available | Negative | 6303335 - 6306406 | 114389.0 |
| protein imub | SAMN04490199_5832 | Not Available | Negative | 6306403 - 6307818 | 52825.5 |
| hypothetical protein | SAMN04490199_5833 | Not Available | Negative | 6307826 - 6308440 | 21475.1 |
| sos-response transcriptional repressor, lexa | SAMN04490199_5834 | Not Available | Negative | 6308440 - 6309057 | 22261.8 |
| nudix-type nucleoside diphosphatase, yffh/adpp family | SAMN04490199_5835 | Not Available | Negative | 6309753 - 6310340 | 22342.6 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04490199_5836 | Not Available | Positive | 6310371 - 6311606 | 44513.1 |
| hypothetical protein | SAMN04490199_5837 | Not Available | Positive | 6311729 - 6312655 | 34247.4 |
| l-lactate dehydrogenase (cytochrome) | SAMN04490199_5838 | Not Available | Negative | 6312849 - 6314009 | 42073.1 |
| protein of unknown function | SAMN04490199_5839 | Not Available | Negative | 6314086 - 6314295 | 7638.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





