Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein terc, possibly involved in tellurium resistance | SAMN04490199_5810 | Not Available | Negative | 6276438 - 6277781 | 48863.8 |
| dna-binding transcriptional regulator lsrr, deor family | SAMN04490199_5811 | Not Available | Negative | 6278171 - 6279151 | 35414.7 |
| ribose-5-phosphate isomerase | SAMN04490199_5812 | Not Available | Negative | 6279215 - 6279676 | 16072.3 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN04490199_5813 | Not Available | Positive | 6279960 - 6281447 | 53384.6 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN04490199_5814 | Not Available | Positive | 6281444 - 6282430 | 34414.1 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN04490199_5815 | Not Available | Positive | 6282468 - 6283475 | 35648.5 |
| 2-deoxy-d-gluconate 3-dehydrogenase | SAMN04490199_5816 | Not Available | Positive | 6283648 - 6284403 | 26256.7 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN04490199_5817 | Not Available | Positive | 6284431 - 6285546 | 41095.0 |
| dihydroxyacetone kinase dhak subunit | SAMN04490199_5818 | Not Available | Positive | 6285603 - 6286604 | 35507.1 |
| dihydroxyacetone kinase dhal subunit | SAMN04490199_5819 | Not Available | Positive | 6286608 - 6287252 | 22313.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





