Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase c | SAMN04490199_5800 | Not Available | Positive | 6268759 - 6269034 | 10125.5 |
| 2-keto-3-deoxygluconate kinase | SAMN04490199_5801 | Not Available | Negative | 6269147 - 6270052 | 32622.0 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN04490199_5802 | Not Available | Negative | 6270170 - 6271378 | 42870.6 |
| dna-binding transcriptional regulator, iclr family | SAMN04490199_5803 | Not Available | Negative | 6271388 - 6272152 | 28447.9 |
| reactive intermediate/imine deaminase | SAMN04490199_5804 | Not Available | Negative | 6272319 - 6272708 | 14106.8 |
| amino acid abc transporter atp-binding protein, paat family | SAMN04490199_5805 | Not Available | Negative | 6272732 - 6273514 | 28960.4 |
| amino acid abc transporter membrane protein 2, paat family | SAMN04490199_5806 | Not Available | Negative | 6273511 - 6274173 | 24441.5 |
| amino acid abc transporter membrane protein 1, paat family | SAMN04490199_5807 | Not Available | Negative | 6274185 - 6274847 | 24626.1 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN04490199_5808 | Not Available | Negative | 6274900 - 6275748 | 30893.6 |
| thioredoxin 1 | SAMN04490199_5809 | Not Available | Positive | 6276121 - 6276483 | 13522.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





