Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490199_5769 | Not Available | Negative | 6232142 - 6237406 | 193426.0 |
| uncharacterized alpha/beta hydrolase domain | SAMN04490199_5770 | Not Available | Negative | 6237995 - 6240340 | 86822.0 |
| protein of unknown function | SAMN04490199_5771 | Not Available | Negative | 6240946 - 6241701 | 28951.6 |
| hypothetical protein | SAMN04490199_5772 | Not Available | Negative | 6241975 - 6242100 | 4673.49 |
| 5-hydroxyisourate hydrolase | SAMN04490199_5773 | Not Available | Negative | 6242230 - 6242583 | 12769.0 |
| putative urate catabolism protein | SAMN04490199_5774 | Not Available | Positive | 6242973 - 6243899 | 35364.9 |
| ohcu decarboxylase | SAMN04490199_5775 | Not Available | Positive | 6243896 - 6244411 | 19253.9 |
| allantoicase | SAMN04490199_5776 | Not Available | Positive | 6244453 - 6245454 | 36725.2 |
| ureidoglycolate lyase | SAMN04490199_5777 | Not Available | Positive | 6245596 - 6246099 | 18684.5 |
| uncharacterized membrane protein | SAMN04490199_5778 | Not Available | Positive | 6246151 - 6247434 | 46322.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





