Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490199_5728 | Not Available | Negative | 6191989 - 6192507 | 18733.7 |
| fumarase, class ii | SAMN04490199_5729 | Not Available | Positive | 6192701 - 6194089 | 49142.9 |
| eama domain-containing membrane protein rard | SAMN04490199_5731 | Not Available | Negative | 6194589 - 6195545 | 34589.7 |
| acetyl-coa acyltransferase | SAMN04490199_5732 | Not Available | Negative | 6195654 - 6196838 | 41884.2 |
| polyphosphate:amp phosphotransferase | SAMN04490199_5733 | Not Available | Negative | 6196931 - 6198448 | 58629.2 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | SAMN04490199_5734 | Not Available | Positive | 6198590 - 6200575 | 71742.7 |
| asparagine synthase (glutamine-hydrolysing) | SAMN04490199_5735 | Not Available | Positive | 6200860 - 6202632 | 65463.2 |
| gnat-family acetyltransferase tigr03103 | SAMN04490199_5736 | Not Available | Positive | 6202636 - 6204381 | 63795.1 |
| hydrolase, peptidase m42 family | SAMN04490199_5737 | Not Available | Positive | 6204457 - 6205641 | 42614.3 |
| hypothetical protein | SAMN04490199_5738 | Not Available | Positive | 6205701 - 6205928 | 8584.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





