Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490199_5704 | Not Available | Positive | 6168258 - 6169043 | 27710.1 |
| 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase | SAMN04490199_5705 | Not Available | Positive | 6169066 - 6169818 | 26556.9 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04490199_5706 | Not Available | Negative | 6170254 - 6171771 | 53707.5 |
| dna-binding transcriptional regulator, acrr family | SAMN04490199_5707 | Not Available | Positive | 6171859 - 6172479 | 23036.5 |
| rnd family efflux transporter, mfp subunit | SAMN04490199_5708 | Not Available | Positive | 6172657 - 6173778 | 39345.0 |
| multidrug efflux pump subunit acrb | SAMN04490199_5709 | Not Available | Positive | 6173775 - 6176861 | 112012.0 |
| Trna-asn | Not Available | Not Available | Positive | 6177351 - 6177426 | Not Available |
| transposase | SAMN04490199_5715 | Not Available | Negative | 6179480 - 6179872 | 14630.6 |
| dnab-like helicase n terminal domain-containing protein | SAMN04490199_5716 | Not Available | Negative | 6179921 - 6180142 | 8076.6 |
| chromosome partitioning related protein para | SAMN04490199_5717 | Not Available | Negative | 6180139 - 6181026 | 32351.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





