Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490199_5684 | Not Available | Positive | 6144354 - 6144710 | 13018.1 |
| fist c domain-containing protein | SAMN04490199_5685 | Not Available | Positive | 6145052 - 6147073 | 72924.1 |
| predicted dienelactone hydrolase | SAMN04490199_5686 | Not Available | Positive | 6147219 - 6148259 | 36254.3 |
| hypothetical protein | SAMN04490199_5687 | Not Available | Negative | 6148314 - 6149525 | 41847.2 |
| dna-binding transcriptional regulator, frmr family | SAMN04490199_5688 | Not Available | Positive | 6149665 - 6149940 | 10090.0 |
| cation diffusion facilitator family transporter | SAMN04490199_5689 | Not Available | Positive | 6149937 - 6150857 | 32408.2 |
| endonuclease g | SAMN04490199_5690 | Not Available | Negative | 6150882 - 6151679 | 28948.3 |
| pilin (type 1 fimbria component protein) | SAMN04490199_5691 | Not Available | Negative | 6151848 - 6152813 | 33448.7 |
| outer membrane usher protein | SAMN04490199_5692 | Not Available | Negative | 6152827 - 6155355 | 92302.7 |
| p pilus assembly protein, chaperone papd | SAMN04490199_5693 | Not Available | Negative | 6155490 - 6156170 | 24541.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





