Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 6. serine peptidase. merops family s11 | SAMN04490199_0503 | Not Available | Positive | 529939 - 531096 | 42123.8 |
| hypothetical protein | SAMN04490199_0504 | Not Available | Positive | 531182 - 531457 | 10215.2 |
| lipoyl(octanoyl) transferase | SAMN04490199_0505 | Not Available | Positive | 531457 - 532104 | 23527.5 |
| lipoic acid synthetase | SAMN04490199_0506 | Not Available | Positive | 532107 - 533132 | 38234.5 |
| muramoyltetrapeptide carboxypeptidase | SAMN04490199_0507 | Not Available | Positive | 533284 - 534216 | 33537.7 |
| membrane-bound lytic murein transglycosylase b | SAMN04490199_0508 | Not Available | Negative | 534346 - 535671 | 47781.8 |
| alternative ribosome-rescue factor | SAMN04490199_0509 | Not Available | Negative | 535733 - 535897 | 6085.22 |
| dna polymerase iii, delta subunit | SAMN04490199_0510 | Not Available | Negative | 536058 - 537095 | 37548.3 |
| lps-assembly lipoprotein | SAMN04490199_0511 | Not Available | Negative | 537135 - 537740 | 22377.8 |
| leucyl-trna synthetase | SAMN04490199_0512 | Not Available | Negative | 537830 - 540436 | 97192.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





