Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase | SAMN04490199_5674 | Not Available | Negative | 6134628 - 6135779 | 41365.7 |
| uncharacterized conserved protein, ntn-hydrolase superfamily | SAMN04490199_5675 | Not Available | Negative | 6135776 - 6136453 | 23502.1 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN04490199_5676 | Not Available | Negative | 6136463 - 6137194 | 26816.0 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN04490199_5677 | Not Available | Negative | 6137245 - 6138075 | 29899.2 |
| phytanoyl-coa dioxygenase (phyh) | SAMN04490199_5678 | Not Available | Negative | 6138104 - 6138976 | 32092.6 |
| polar amino acid transport system permease protein | SAMN04490199_5679 | Not Available | Negative | 6139002 - 6140519 | 56057.0 |
| dna-binding transcriptional regulator, lysr family | SAMN04490199_5680 | Not Available | Negative | 6140842 - 6141816 | 35467.8 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04490199_5681 | Not Available | Positive | 6142013 - 6142435 | 15633.7 |
| 3-dehydroquinate dehydratase | SAMN04490199_5682 | Not Available | Positive | 6142490 - 6142939 | 15895.8 |
| putative flavoprotein involved in k+ transport | SAMN04490199_5683 | Not Available | Positive | 6143028 - 6144278 | 45615.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





