Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490199_5609 | Not Available | Positive | 6070536 - 6070799 | 10013.5 |
| hypothetical protein | SAMN04490199_5610 | Not Available | Positive | 6070895 - 6071191 | 10555.6 |
| sugar-phosphatase | SAMN04490199_5611 | Not Available | Negative | 6071211 - 6071888 | 24333.9 |
| hypothetical protein | SAMN04490199_5612 | Not Available | Positive | 6072207 - 6072311 | 3865.85 |
| Trna-val | Not Available | Not Available | Positive | 6072434 - 6072510 | Not Available |
| gamma-glutamylputrescine oxidase | SAMN04490199_5614 | Not Available | Positive | 6072695 - 6073978 | 46440.8 |
| Trna-asp | Not Available | Not Available | Positive | 6074203 - 6074279 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 6074385 - 6074461 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 6074517 - 6074592 | Not Available |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490199_5618 | Not Available | Negative | 6074700 - 6075464 | 26644.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





