Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphatase | SAMN04490199_0493 | Not Available | Negative | 519530 - 520846 | 47191.8 |
| dna-3-methyladenine glycosylase | SAMN04490199_0494 | Not Available | Negative | 520872 - 521555 | 25398.4 |
| glutamate-5-semialdehyde dehydrogenase | SAMN04490199_0495 | Not Available | Positive | 521730 - 522995 | 45432.6 |
| nicotinate-nucleotide adenylyltransferase | SAMN04490199_0496 | Not Available | Positive | 522995 - 523639 | 23581.4 |
| ribosome-associated protein | SAMN04490199_0497 | Not Available | Positive | 523709 - 524203 | 18102.6 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN04490199_0498 | Not Available | Positive | 524213 - 524680 | 17681.5 |
| peptidoglycan glycosyltransferase /cell elongation-specific peptidoglycan d,d-transpeptidase | SAMN04490199_0499 | Not Available | Positive | 524696 - 526594 | 70371.5 |
| cell elongation-specific peptidoglycan biosynthesis regulator roda | SAMN04490199_0500 | Not Available | Positive | 526584 - 527729 | 41773.8 |
| membrane-bound lytic murein transglycosylase b | SAMN04490199_0501 | Not Available | Positive | 527741 - 528757 | 37930.0 |
| rare lipoprotein a | SAMN04490199_0502 | Not Available | Positive | 528757 - 529755 | 35631.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





