Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | SAMN04490199_0483 | Not Available | Positive | 512018 - 513367 | 48350.9 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN04490199_0484 | Not Available | Positive | 513364 - 513993 | 22639.6 |
| uncharacterized conserved protein ycek | SAMN04490199_0485 | Not Available | Positive | 513986 - 514270 | 9464.73 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04490199_0486 | Not Available | Negative | 514330 - 514971 | 23432.8 |
| uncharacterized conserved protein | SAMN04490199_0487 | Not Available | Negative | 515002 - 516720 | 62265.6 |
| acyl dehydratase | SAMN04490199_0488 | Not Available | Negative | 516916 - 517371 | 16793.5 |
| putative effector of murein hydrolase lrga, upf0299 family | SAMN04490199_0489 | Not Available | Positive | 517531 - 517893 | 13015.8 |
| tigr00659 family protein | SAMN04490199_0490 | Not Available | Positive | 517890 - 518606 | 25213.9 |
| hypothetical protein | SAMN04490199_0491 | Not Available | Positive | 518628 - 519218 | 21779.1 |
| hypothetical protein | SAMN04490199_0492 | Not Available | Positive | 519321 - 519536 | 8075.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





