Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN04490199_0443 | Not Available | Negative | 464466 - 466364 | 68328.6 |
| farnesyl-diphosphate synthase | SAMN04490199_0444 | Not Available | Negative | 466475 - 467362 | 31220.3 |
| exodeoxyribonuclease vii small subunit | SAMN04490199_0445 | Not Available | Negative | 467359 - 467601 | 8906.36 |
| predicted transcriptional regulator yheo, contains pas and dna-binding hth domains | SAMN04490199_0446 | Not Available | Negative | 467701 - 468312 | 22095.3 |
| ornithine cyclodeaminase | SAMN04490199_0447 | Not Available | Negative | 468371 - 469339 | 34057.9 |
| dna-binding transcriptional regulator, merr family | SAMN04490199_0448 | Not Available | Negative | 469460 - 469831 | 13576.7 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN04490199_0449 | Not Available | Negative | 469770 - 470414 | 23755.9 |
| hypothetical protein | SAMN04490199_0450 | Not Available | Negative | 470517 - 470795 | 10410.4 |
| hypothetical protein | SAMN04490199_0451 | Not Available | Positive | 470924 - 471184 | 9791.22 |
| uncharacterized conserved protein, duf697 family | SAMN04490199_0452 | Not Available | Positive | 471392 - 472522 | 40826.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





