Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMN04490199_0433 | Not Available | Positive | 455424 - 456560 | 39828.2 |
| riboflavin synthase alpha chain | SAMN04490199_0434 | Not Available | Positive | 456608 - 457285 | 23740.5 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase /gtp cyclohydrolase ii | SAMN04490199_0435 | Not Available | Positive | 457301 - 458392 | 39426.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN04490199_0436 | Not Available | Positive | 458481 - 458957 | 16449.0 |
| nusb antitermination factor | SAMN04490199_0437 | Not Available | Positive | 458954 - 459454 | 18878.4 |
| thiamine-phosphate kinase | SAMN04490199_0438 | Not Available | Positive | 459473 - 460438 | 32836.7 |
| gtp cyclohydrolase ii | SAMN04490199_0439 | Not Available | Positive | 460581 - 461198 | 22412.2 |
| hypothetical protein | SAMN04490199_0440 | Not Available | Positive | 461195 - 461614 | 15532.6 |
| vitamin b12 transport system substrate-binding protein | SAMN04490199_0441 | Not Available | Positive | 461611 - 462411 | 28921.4 |
| vitamin b12 transporter | SAMN04490199_0442 | Not Available | Negative | 462440 - 464332 | 70459.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





