Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | SAMN04490199_0423 | Not Available | Negative | 448301 - 449002 | 24647.1 |
| hypothetical protein | SAMN04490199_0424 | Not Available | Negative | 449097 - 449618 | 19152.1 |
| putative abc transport system permease protein | SAMN04490199_0425 | Not Available | Negative | 449630 - 450895 | 46088.4 |
| putative abc transport system atp-binding protein | SAMN04490199_0426 | Not Available | Negative | 450897 - 451607 | 25631.7 |
| protein of unknown function | SAMN04490199_0427 | Not Available | Negative | 451614 - 452219 | 21469.0 |
| hypothetical protein | SAMN04490199_0428 | Not Available | Positive | 452352 - 452702 | 12445.9 |
| thioredoxin | SAMN04490199_0429 | Not Available | Negative | 452804 - 453676 | 31648.8 |
| predicted nicotinamide n-methyase | SAMN04490199_0430 | Not Available | Negative | 453709 - 454371 | 24219.8 |
| uncharacterized lipoprotein ybay | SAMN04490199_0431 | Not Available | Negative | 454368 - 454823 | 16108.7 |
| transcriptional repressor nrdr | SAMN04490199_0432 | Not Available | Positive | 454963 - 455427 | 17800.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





