Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterioferritin | SAMN04490199_0413 | Not Available | Positive | 433662 - 434126 | 18099.6 |
| excinuclease abc subunit a | SAMN04490199_0414 | Not Available | Negative | 434193 - 437027 | 104271.0 |
| predicted arabinose efflux permease, mfs family | SAMN04490199_0415 | Not Available | Positive | 437206 - 438600 | 49518.2 |
| single-strand binding protein | SAMN04490199_0416 | Not Available | Positive | 438610 - 439125 | 18990.2 |
| non-heme chloroperoxidase | SAMN04490199_0417 | Not Available | Negative | 439208 - 440032 | 30417.0 |
| trans-aconitate 2-methyltransferase | SAMN04490199_0418 | Not Available | Positive | 440285 - 441046 | 28006.1 |
| nicotinamidase-related amidase | SAMN04490199_0419 | Not Available | Negative | 441068 - 441631 | 20206.9 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04490199_0420 | Not Available | Positive | 441729 - 442700 | 34593.5 |
| atp dependent helicase, lhr family | SAMN04490199_0421 | Not Available | Negative | 442866 - 447113 | 155632.0 |
| dtdp-4-dehydrorhamnose reductase | SAMN04490199_0422 | Not Available | Positive | 447295 - 448164 | 31815.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





