Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, acrr family | SAMN04490199_0349 | Not Available | Positive | 376696 - 377319 | 22977.8 |
| abc-type amino acid transport substrate-binding protein | SAMN04490199_0350 | Not Available | Positive | 377475 - 378200 | 27138.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04490199_0351 | Not Available | Negative | 378237 - 378788 | 20632.7 |
| surfactin synthase thioesterase subunit | SAMN04490199_0352 | Not Available | Positive | 379092 - 379844 | 27770.6 |
| non-ribosomal peptide synthase domain tigr01720/amino acid adenylation domain-containing protein | SAMN04490199_0353 | Not Available | Positive | 379890 - 392786 | 474657.0 |
| thiol:disulfide interchange protein dsbc | SAMN04490199_0354 | Not Available | Negative | 392901 - 393662 | 27476.2 |
| thiol-disulfide isomerase or thioredoxin | SAMN04490199_0355 | Not Available | Negative | 393638 - 394498 | 31230.3 |
| thiol:disulfide interchange protein dsbd | SAMN04490199_0356 | Not Available | Negative | 394498 - 396225 | 61388.2 |
| response regulator receiver domain-containing protein | SAMN04490199_0357 | Not Available | Positive | 396403 - 396606 | 7112.65 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN04490199_0361 | Not Available | Positive | 398704 - 399663 | 34528.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





