Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 296552 - 298092 | 18.01 |
| transcriptional regulator, marr family | SAMN04490199_0269 | Not Available | Positive | 297969 - 298403 | 16324.9 |
| nte family protein | SAMN04490199_0270 | Not Available | Negative | 298540 - 300729 | 80840.6 |
| selenoprotein w-related protein | SAMN04490199_0271 | Not Available | Positive | 300814 - 301101 | 10668.8 |
| hypothetical protein | SAMN04490199_0272 | Not Available | Negative | 301143 - 301424 | 8977.22 |
| threonine/homoserine efflux transporter rhta | SAMN04490199_0273 | Not Available | Negative | 301552 - 302436 | 30685.6 |
| arac-type dna-binding protein | SAMN04490199_0274 | Not Available | Negative | 302533 - 303285 | 27441.0 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN04490199_0275 | Not Available | Positive | 303423 - 304232 | 31156.2 |
| aromatic amino acid aminotransferase apoenzyme | SAMN04490199_0276 | Not Available | Negative | 304363 - 305559 | 42840.2 |
| pterin-4-alpha-carbinolamine dehydratase | SAMN04490199_0277 | Not Available | Negative | 305559 - 305915 | 13307.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





