Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory inactivation of dnaa hda protein | SAMN04490199_0241 | Not Available | Positive | 269849 - 270553 | 26440.2 |
| nlpc/p60 family protein | SAMN04490199_0242 | Not Available | Positive | 270767 - 271396 | 22844.2 |
| cell wall-associated hydrolase, nlpc family | SAMN04490199_0243 | Not Available | Positive | 271541 - 272077 | 18867.6 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04490199_0244 | Not Available | Negative | 272211 - 273524 | 46438.0 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMN04490199_0245 | Not Available | Positive | 273948 - 274559 | 22456.2 |
| hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase | SAMN04490199_0246 | Not Available | Positive | 274556 - 275923 | 48382.3 |
| cob(ii)yrinic acid a,c-diamide reductase /5,6-dimethylbenzimidazole synthase | SAMN04490199_0247 | Not Available | Positive | 275920 - 276570 | 24346.6 |
| adenosylcobinamide-phosphate synthase | SAMN04490199_0248 | Not Available | Positive | 276567 - 277475 | 32963.9 |
| l-threonine o-3-phosphate decarboxylase | SAMN04490199_0249 | Not Available | Positive | 277468 - 278457 | 36712.3 |
| adenosylcobyric acid synthase (glutamine-hydrolysing) | SAMN04490199_0250 | Not Available | Positive | 278454 - 279905 | 51611.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





