Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna m(5)u-1939 methyltransferase | SAMN04490199_0229 | Not Available | Positive | 258127 - 259479 | 49446.9 |
| gtp pyrophosphokinase | SAMN04490199_0230 | Not Available | Positive | 259614 - 261857 | 83579.8 |
| atp diphosphatase | SAMN04490199_0233 | Not Available | Positive | 262738 - 263571 | 31454.0 |
| hypothetical protein | SAMN04490199_0234 | Not Available | Positive | 263597 - 264142 | 20698.7 |
| hypothetical protein | SAMN04490199_0235 | Not Available | Negative | 264234 - 264422 | 7255.41 |
| protein of unknown function | SAMN04490199_0236 | Not Available | Negative | 264702 - 265415 | 26185.2 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN04490199_0237 | Not Available | Negative | 265424 - 266074 | 23356.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN04490199_0238 | Not Available | Negative | 266074 - 267132 | 36946.8 |
| hypothetical protein | SAMN04490199_0239 | Not Available | Positive | 267488 - 268528 | 37233.0 |
| predicted purr-regulated permease perm | SAMN04490199_0240 | Not Available | Positive | 268572 - 269645 | 38532.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





