Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase kinase/phosphatase | SAMN04490199_0189 | Not Available | Positive | 210424 - 212145 | 65848.5 |
| atp-dependent helicase hrpa | SAMN04490199_0190 | Not Available | Positive | 212216 - 216127 | 147348.0 |
| beta-ketodecanoyl-[acyl-carrier-protein] synthase | SAMN04490199_0191 | Not Available | Positive | 216356 - 217477 | 40430.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04490199_0192 | Not Available | Positive | 217564 - 218178 | 23143.6 |
| putative zinc-finger | SAMN04490199_0193 | Not Available | Positive | 218172 - 218405 | 9140.31 |
| putative porin | SAMN04490199_0194 | Not Available | Negative | 218526 - 219848 | 48291.1 |
| hypothetical protein | SAMN04490199_0195 | Not Available | Positive | 220134 - 221258 | 42525.3 |
| aquaporin z | SAMN04490199_0196 | Not Available | Negative | 221271 - 221972 | 23702.6 |
| atp-binding cassette, subfamily b, multidrug efflux pump | SAMN04490199_0197 | Not Available | Negative | 222150 - 223982 | 67377.3 |
| peptidyl-prolyl cis-trans isomerase a (cyclophilin a) | SAMN04490199_0198 | Not Available | Negative | 224066 - 224629 | 20105.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





