Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex protein rnfa | SAMN04490199_3443 | Not Available | Negative | 3721961 - 3722533 | 20228.7 |
| methionyl-trna synthetase | SAMN04490199_3444 | Not Available | Negative | 3722637 - 3724688 | 75712.2 |
| Gp12, partition protein | SAMN04490199_3445 | Not Available | Positive | 3724860 - 3725954 | 38322.6 |
| ferredoxin | SAMN04490199_3447 | Not Available | Negative | 3726453 - 3726776 | 12221.4 |
| Putative mismatch repair protein | SAMN04490199_3448 | Not Available | Negative | 3726919 - 3729510 | 95772.2 |
| Putative cro/ci transcriptional regulator | SAMN04490199_3449 | Not Available | Positive | 3729708 - 3730442 | 27626.7 |
| bacteriophage holin hol, superfamily iii | SAMN04490199_3450 | Not Available | Positive | 3731153 - 3731497 | 12135.0 |
| Putative phage-related protein | SAMN04490199_3451 | Not Available | Positive | 3731518 - 3732033 | 18376.6 |
| Putative baseplate assembly protein v | SAMN04490199_3452 | Not Available | Positive | 3732037 - 3732648 | 21517.5 |
| Putative baseplate assembly protein | SAMN04490199_3453 | Not Available | Positive | 3732658 - 3732990 | 12127.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





