Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase-3 | SAMN04490199_0136 | Not Available | Negative | 158433 - 160388 | 71182.2 |
| sugar transporter | SAMN04490199_0137 | Not Available | Negative | 160549 - 162171 | 58563.3 |
| choline dehydrogenase | SAMN04490199_0138 | Not Available | Negative | 162287 - 163954 | 59975.7 |
| dna-binding transcriptional regulator, lysr family | SAMN04490199_0139 | Not Available | Positive | 164084 - 164977 | 33151.2 |
| 3-methyladenine dna glycosylase alkc | SAMN04490199_0140 | Not Available | Negative | 165636 - 166733 | 40726.8 |
| glutamine synthetase | SAMN04490199_0141 | Not Available | Negative | 166753 - 168099 | 50075.7 |
| helix-turn-helix domain-containing protein | SAMN04490199_0142 | Not Available | Negative | 168111 - 168692 | 21672.8 |
| predicted arabinose efflux permease, mfs family | SAMN04490199_0143 | Not Available | Positive | 168877 - 170070 | 43470.4 |
| protein of unknown function | SAMN04490199_0144 | Not Available | Negative | 170033 - 170305 | 10090.0 |
| pas domain s-box-containing protein | SAMN04490199_0145 | Not Available | Negative | 170436 - 171932 | 55393.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





