Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine/homoserine lactone efflux protein | SAMN04490199_0126 | Not Available | Negative | 150031 - 150645 | 21822.5 |
| protein of unknown function | SAMN04490199_0127 | Not Available | Positive | 150790 - 151875 | 40095.2 |
| uncharacterized domain 1-containing protein | SAMN04490199_0128 | Not Available | Positive | 152002 - 152418 | 14657.9 |
| acetyl-coa acetyltransferase | SAMN04490199_0129 | Not Available | Negative | 152478 - 153659 | 40290.7 |
| 3-oxoacid coa-transferase subunit b | SAMN04490199_0130 | Not Available | Negative | 153671 - 154330 | 23422.7 |
| 3-oxoacid coa-transferase subunit a | SAMN04490199_0131 | Not Available | Negative | 154367 - 155065 | 25061.2 |
| transcriptional regulator, lysr family | SAMN04490199_0132 | Not Available | Positive | 155199 - 156101 | 32968.3 |
| hypothetical protein | SAMN04490199_0133 | Not Available | Negative | 156159 - 156488 | 12664.9 |
| nad-dependent protein deacetylase, sir2 family | SAMN04490199_0134 | Not Available | Negative | 157007 - 157852 | 31013.6 |
| cbs domain-containing protein | SAMN04490199_0135 | Not Available | Negative | 157861 - 158301 | 16109.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





