Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine permease | SAMN04490199_0096 | Not Available | Negative | 120237 - 121505 | 44918.1 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04490199_0097 | Not Available | Negative | 121697 - 122320 | 23061.4 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN04490199_0098 | Not Available | Negative | 122352 - 122708 | 13617.3 |
| hypothetical protein | SAMN04490199_0099 | Not Available | Negative | 122786 - 123865 | 39683.1 |
| peptidase propeptide and ypeb domain-containing protein | SAMN04490199_0100 | Not Available | Positive | 124025 - 124327 | 10697.6 |
| peptidase propeptide and ypeb domain-containing protein | SAMN04490199_0101 | Not Available | Positive | 124327 - 124638 | 11471.7 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04490199_0102 | Not Available | Positive | 124638 - 125306 | 24892.8 |
| signal transduction histidine kinase | SAMN04490199_0103 | Not Available | Positive | 125303 - 126616 | 48664.0 |
| methyl-accepting chemotaxis protein | SAMN04490199_0104 | Not Available | Negative | 126864 - 129011 | 76755.2 |
| hypothetical protein | SAMN04490199_0105 | Not Available | Positive | 129238 - 130560 | 45999.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





