Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN04490199_0055 | Not Available | Positive | 78075 - 79682 | 59711.7 |
| 2-keto-4-pentenoate hydratase | SAMN04490199_0056 | Not Available | Positive | 79679 - 80458 | 28109.8 |
| helix-turn-helix domain-containing protein | SAMN04490199_0057 | Not Available | Positive | 80535 - 81476 | 35303.3 |
| abc transporter transmembrane region | SAMN04490199_0058 | Not Available | Negative | 81484 - 82404 | 33377.5 |
| hypothetical protein | SAMN04490199_0059 | Not Available | Negative | 82392 - 82754 | 13529.1 |
| hypothetical protein | SAMN04490199_0060 | Not Available | Negative | 82783 - 82995 | 8035.69 |
| two-component system, ompr family, sensor histidine kinase ades | SAMN04490199_0061 | Not Available | Negative | 83048 - 84151 | 39765.8 |
| two component transcriptional regulator, winged helix family | SAMN04490199_0062 | Not Available | Negative | 84148 - 84876 | 26770.4 |
| arac-type dna-binding protein | SAMN04490199_0063 | Not Available | Negative | 85066 - 85893 | 31368.5 |
| ornithine cyclodeaminase | SAMN04490199_0064 | Not Available | Positive | 86079 - 87218 | 41453.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





