Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groes | SAMN04490199_1004 | Not Available | Positive | 1052221 - 1052517 | 10261.4 |
| chaperonin groel | SAMN04490199_1005 | Not Available | Positive | 1052568 - 1054214 | 57035.9 |
| membrane-associated enzyme, pap2 (acid phosphatase) superfamily | SAMN04490199_1006 | Not Available | Negative | 1054322 - 1055059 | 27260.8 |
| phosphoglycerol transferase mdob | SAMN04490199_1007 | Not Available | Negative | 1055110 - 1057059 | 72270.0 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04490199_1008 | Not Available | Positive | 1057263 - 1057946 | 25421.8 |
| signal transduction histidine kinase | SAMN04490199_1009 | Not Available | Positive | 1057936 - 1059216 | 47785.0 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04490199_1010 | Not Available | Positive | 1059404 - 1060084 | 26123.6 |
| lipopolysaccharide kinase (kdo/waap) family protein | SAMN04490199_1011 | Not Available | Positive | 1060089 - 1060808 | 27560.9 |
| hypothetical protein | SAMN04490199_1012 | Not Available | Positive | 1060805 - 1061032 | 7907.92 |
| hypothetical protein | SAMN04490199_1013 | Not Available | Negative | 1061130 - 1062230 | 39922.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





