Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1353578 bp
Thymine Count
1375659 bp
Guanine Count
2135231 bp
Cytosine Count
2100551 bp
Genome Length
6965019 bp
Protein-coding Genes
6106 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04490199_0983 | Not Available | Positive | 1028364 - 1028648 | 10074.2 |
| conserved hypothetical protein | SAMN04490199_0984 | Not Available | Negative | 1028819 - 1029751 | 35011.5 |
| formyl-coa transferase | SAMN04490199_0985 | Not Available | Negative | 1029705 - 1030904 | 43552.7 |
| uncharacterized conserved protein yaeq, suppresses rfah defect | SAMN04490199_0986 | Not Available | Positive | 1031053 - 1031595 | 20727.7 |
| exonuclease recj | SAMN04490199_0987 | Not Available | Positive | 1031653 - 1033362 | 62215.4 |
| type iv secretory pathway, virj component | SAMN04490199_0988 | Not Available | Negative | 1033470 - 1034750 | 46265.1 |
| phosphatidylglycerol lysyltransferase | SAMN04490199_0989 | Not Available | Negative | 1034750 - 1037392 | 96515.7 |
| Trna-met | Not Available | Not Available | Positive | 1037660 - 1037736 | Not Available |
| abc-2 type transport system permease protein | SAMN04490199_0991 | Not Available | Negative | 1037911 - 1039035 | 41245.0 |
| ribosome-dependent atpase | SAMN04490199_0992 | Not Available | Negative | 1039037 - 1041778 | 99499.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





