Amycolatopsis tolypomycina strain DSM 44544

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis tolypomycina strain DSM 44544 is a mesophilic actinobacterium characterized by its motility, as it possesses flagella. The optimal growth temperature for this strain is 29°C, which positions it within the mesophilic temperature range. This strain is notable for its genetic simplicity, having a single replicon, which may influence its replication and genetic stability. In terms of reproductive strategy, Amycolatopsis tolypomycina strain DSM 44544 does not form spores, which is a distinctive feature among many bacteria. This trait suggests a reliance on other mechanisms for survival and propagation in its natural environment. The strain is cataloged with the accession number FNSO00000000.1, which facilitates its identification and classification within microbial databases. The presence of flagella indicates that this bacterium can exhibit motility, allowing it to navigate its environment, potentially aiding in nutrient acquisition or evasion from unfavorable conditions. The combination of its mesophilic nature and motility may allow Amycolatopsis tolypomycina strain DSM 44544 to thrive in various terrestrial ecosystems where moderate temperatures prevail. Understanding the ecological role of such bacteria can provide insights into nutrient cycling and soil health, highlighting their importance in the microbiome of terrestrial habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis tolypomycina
Strainstrain DSM 44544

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis tolypomycina strain DSM 44544 genome assembly,

Gene Summary

Adenine Count

1468247 bp

Thymine Count

1467249 bp

Guanine Count

3705625 bp

Cytosine Count

3722310 bp

Genome Length

10363431 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine synthase bSAMN04489727_8163Not AvailableNegative8918002 - 891895233806.2
molybdopterin converting factor, small subunitSAMN04489727_8164Not AvailableNegative8918956 - 89192289554.47
proteasome lid subunit rpn8/rpn11, contains jab1/mpn metalloenzyme (jamm) motifSAMN04489727_8165Not AvailableNegative8919294 - 891970115239.7
l-aminopeptidase/d-esteraseSAMN04489727_8166Not AvailableNegative8919766 - 892073432483.3
protein of unknown functionSAMN04489727_8167Not AvailableNegative8920731 - 892128820423.1
atp-dependent clp protease adaptor protein clpsSAMN04489727_8168Not AvailableNegative8921285 - 892158410919.9
nicotinate phosphoribosyltransferaseSAMN04489727_8169Not AvailablePositive8921659 - 892296045816.3
nicotinamidase/pyrazinamidaseSAMN04489727_8170Not AvailablePositive8922974 - 892355219615.7
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN04489727_8171Not AvailablePositive8923549 - 892419321324.8
hypothetical proteinSAMN04489727_8172Not AvailableNegative8924223 - 892487021802.1

Displaying genes 7981 – 7990 of 9382 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.