Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis tolypomycina |
| Strain | strain DSM 44544 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1468247 bp
Thymine Count
1467249 bp
Guanine Count
3705625 bp
Cytosine Count
3722310 bp
Genome Length
10363431 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, sigma-e family | SAMN04489727_7158 | Not Available | Positive | 7827074 - 7827604 | 19482.3 |
| hypothetical protein | SAMN04489727_7159 | Not Available | Positive | 7827601 - 7828377 | 26769.3 |
| ricin-type beta-trefoil lectin domain-like | SAMN04489727_7160 | Not Available | Positive | 7828573 - 7830063 | 53024.4 |
| caax protease self-immunity | SAMN04489727_7161 | Not Available | Positive | 7830139 - 7830966 | 30051.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04489727_7162 | Not Available | Negative | 7831028 - 7831771 | 26160.0 |
| hypothetical protein | SAMN04489727_7163 | Not Available | Negative | 7831768 - 7832103 | 12212.2 |
| protein of unknown function | SAMN04489727_7164 | Not Available | Negative | 7832437 - 7833459 | 37761.9 |
| hypothetical protein | SAMN04489727_7165 | Not Available | Negative | 7833456 - 7834283 | 30850.8 |
| helix-turn-helix domain-containing protein | SAMN04489727_7166 | Not Available | Positive | 7834791 - 7836239 | 51941.6 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04489727_7167 | Not Available | Negative | 7836230 - 7836787 | 20965.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
