Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis tolypomycina |
| Strain | strain DSM 44544 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1468247 bp
Thymine Count
1467249 bp
Guanine Count
3705625 bp
Cytosine Count
3722310 bp
Genome Length
10363431 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nipsnap protein | SAMN04489727_0022 | Not Available | Positive | 16145 - 16465 | 12267.5 |
| dna-binding transcriptional regulator, iclr family | SAMN04489727_0023 | Not Available | Positive | 16462 - 17232 | 27194.7 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN04489727_0024 | Not Available | Positive | 17286 - 18500 | 43038.0 |
| p-hydroxybenzoate 3-monooxygenase | SAMN04489727_0025 | Not Available | Positive | 18500 - 19669 | 43228.4 |
| clp amino terminal domain-containing protein, pathogenicity island component | SAMN04489727_0026 | Not Available | Positive | 19721 - 20458 | 26085.2 |
| 6-phosphogluconate dehydrogenase | SAMN04489727_0027 | Not Available | Negative | 20563 - 22002 | 51149.1 |
| cyclase | SAMN04489727_0028 | Not Available | Negative | 22089 - 23009 | 33007.9 |
| helix-turn-helix domain-containing protein | SAMN04489727_0029 | Not Available | Positive | 23219 - 24109 | 33593.2 |
| s-adenosyl methyltransferase | SAMN04489727_0030 | Not Available | Positive | 24259 - 25110 | 30358.7 |
| o-methyltransferase involved in polyketide biosynthesis | SAMN04489727_0031 | Not Available | Positive | 25082 - 25930 | 31118.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
