Amycolatopsis tolypomycina strain DSM 44544

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis tolypomycina strain DSM 44544 is a mesophilic actinobacterium characterized by its motility, as it possesses flagella. The optimal growth temperature for this strain is 29°C, which positions it within the mesophilic temperature range. This strain is notable for its genetic simplicity, having a single replicon, which may influence its replication and genetic stability. In terms of reproductive strategy, Amycolatopsis tolypomycina strain DSM 44544 does not form spores, which is a distinctive feature among many bacteria. This trait suggests a reliance on other mechanisms for survival and propagation in its natural environment. The strain is cataloged with the accession number FNSO00000000.1, which facilitates its identification and classification within microbial databases. The presence of flagella indicates that this bacterium can exhibit motility, allowing it to navigate its environment, potentially aiding in nutrient acquisition or evasion from unfavorable conditions. The combination of its mesophilic nature and motility may allow Amycolatopsis tolypomycina strain DSM 44544 to thrive in various terrestrial ecosystems where moderate temperatures prevail. Understanding the ecological role of such bacteria can provide insights into nutrient cycling and soil health, highlighting their importance in the microbiome of terrestrial habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis tolypomycina
Strainstrain DSM 44544

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis tolypomycina strain DSM 44544 genome assembly,

Gene Summary

Adenine Count

1468247 bp

Thymine Count

1467249 bp

Guanine Count

3705625 bp

Cytosine Count

3722310 bp

Genome Length

10363431 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidaseSAMN04489727_0291Not AvailableNegative309718 - 31021218299.6
cytochrome p450SAMN04489727_0292Not AvailableNegative310268 - 31147944460.3
cytochrome p450SAMN04489727_0293Not AvailableNegative311505 - 31277046613.2
cdp-6-deoxy-d-xylo-4-hexulose-3-dehydraseSAMN04489727_0294Not AvailableNegative312824 - 31413147448.6
udp:flavonoid glycosyltransferase yjic, ydhe familySAMN04489727_0295Not AvailablePositive314262 - 31547342917.6
dtdp-4-dehydrorhamnose 3,5-epimeraseSAMN04489727_0296Not AvailablePositive315480 - 31612723260.8
hypothetical proteinSAMN04489727_0297Not AvailableNegative316187 - 31749145596.8
predicted dehydrogenaseSAMN04489727_0298Not AvailableNegative317511 - 31848233999.9
probable f420-dependent oxidoreductase, msmeg_2516 familySAMN04489727_0299Not AvailablePositive318619 - 31950331833.4
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN04489727_0300Not AvailablePositive319526 - 32057839268.9

Displaying genes 321 – 330 of 9382 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.