Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis tolypomycina |
| Strain | strain DSM 44544 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1468247 bp
Thymine Count
1467249 bp
Guanine Count
3705625 bp
Cytosine Count
3722310 bp
Genome Length
10363431 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | SAMN04489727_3044 | Not Available | Positive | 3113269 - 3113886 | 21107.4 |
| probable f420-dependent oxidoreductase, msmeg_2906 family | SAMN04489727_3045 | Not Available | Negative | 3113932 - 3114711 | 28610.8 |
| phytoene synthase | SAMN04489727_3046 | Not Available | Negative | 3114708 - 3115634 | 33786.9 |
| phytoene desaturase | SAMN04489727_3047 | Not Available | Negative | 3115631 - 3117103 | 52276.8 |
| geranylgeranyl diphosphate synthase, type i | SAMN04489727_3048 | Not Available | Negative | 3117105 - 3118196 | 37746.9 |
| alkylmercury lyase | SAMN04489727_3049 | Not Available | Negative | 3118258 - 3118947 | 24924.5 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN04489727_3050 | Not Available | Positive | 3119006 - 3119881 | 32020.4 |
| uncharacterized conserved protein, duf885 familyt | SAMN04489727_3051 | Not Available | Positive | 3119924 - 3121606 | 61237.1 |
| hypothetical protein | SAMN04489727_3052 | Not Available | Negative | 3121649 - 3121924 | 10270.4 |
| hypothetical protein | SAMN04489727_3053 | Not Available | Negative | 3121965 - 3122708 | 26571.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
